Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYPFNHKEFVAMMEQYNLKSNSITIPEHTILNDLVTENRDCVYLLKSGILAGYIDF--DNDKIYSIFTSNFFMGYYTIFDNSSLVLTYQTLTECELIIYKKKDIEYSLSLFPENFSFQYTIMRTIAKHGY----YKSLLQYRDKKDQLAFVFEMLVKILDIPVEDGVAVLPKSISTTVIKNYCTLSKAFFYSQLKELKEAGIISKVKLQWRINM-EALSEKNNSIN
3B02 Chain:A ((2-189))
-----------------------KRFARKETIYLRGEE-ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEG-KAYRYTAEAMTEAVVQGLEPRAMDH---------EALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSAR--DRQGIYVTVSHEEIADATASIRESVSKVLADLRREGLIATAYRRVYLLDLAALEREAG---
General information:
TITO was launched using:
RESULT:
Template:
3B02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142724 for 1380 contacts (-103.4/contact) +
2D Compatibility (PS) -19103 + (NN) -3481 + (LL) 2200
1D Compatibility (HY) 800 + (ID) 1150
Total energy: -163458.0 ( -118.45 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_3B02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B02-query.scw
PDB file :
Tito_Scwrl_3B02.pdb
: