Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLY-VSGCPFHCEGCYNKAAQSFKYGKPYTKELEDDILKDIGH----------ESVQGLTLLG-GEPFLNTATCLSIVKRIRATYGE----TKDIWSWTGYTWDEMMQETADKLEL-LSLIDVLVDGRFEQKLFDPNLAFR-GSSNQRIIDVQKSLAAGEVVLYEL |
| 3RFA Chain:A ((115-267)) | --------------------------------ATLCVSSQVGCALECKFCSTAQQGF---NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKL-----GDMIDVALAISLHAPNDE-IRDEIVPINKKYNIETFLAAVRRYLEK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26539 for 987 contacts (-26.9/contact) +
2D Compatibility (PS) -14277 + (NN) -2804 + (LL) 2668
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -46052.0 ( -46.66 by residue)
QMean score : 0.347
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