Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VIYYICALYTFISALVSFGF-SLDALLKSRKVNGDALINAKYAVSRSLSLLIVALGLFIFKSDAFLVALSLVMIGAQLFDGIIGIKISTFKTVGPLLTAVGNVIMLILFLTI
1Z96 Chain:A ((295-332))
------GLNSKIAQLVSMGFDPLEAAQALDAANGDLDVAASFLL--------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z96.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12942 for 234 contacts (-55.3/contact) +
2D Compatibility (PS) -4022 + (NN) -2370 + (LL) 7472
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -14112.0 ( -60.31 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_1Z96.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z96-query.scw
PDB file :
Tito_Scwrl_1Z96.pdb
: