Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLLRKPLNERIAPGVTLVQDINQGNSPLSYVGFRLIELEEDAVYQETLDGLECCIVALTGKISVSEGDHVFSEIGTRANVFEKIPTDSVFISGGRAFQVKADA---EKARVALCYSPADRNLPTTLIKASDNSIEQRGKY--QNKRLVHNILPDVSEVASSLLVVEV-YTDGGNFSSYPPHKHDHDNLPAESLLEESYYHEINPKQGFIFQRVYTDDRALDETMAVEHQNAVIVPEG-YHPVGVPDGYDSYYLNVMAGPKRVWEFHNDPDHEWILERD |
| 1XRU Chain:A ((74-279)) | -----------------------------------------------YFLERRELGVINIGGAGTITVDGQCY-EIG--------H-RDALYVGKGAKEVVFASIDTGTPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRM--------EVYFYFNMDDDACVFHMMGQPQET--RHIVMHNEQAVISPSWSIHSGVGTKAYT--FIWGMVGENQVF---DDMDHVAVKE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60992 for 1553 contacts (-39.3/contact) +
2D Compatibility (PS) -21355 + (NN) -4896 + (LL) 4844
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -92799.0 ( -59.75 by residue)
QMean score : 0.292
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