Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYIAGIDIGNSTTEVALAMANSSKEAAFVASAITDTTGIKGTKQNLHGIFKALRLALEKVNATTEDLAEIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGLGMGSGVTVLLDDVTSKSKDADYIVIIPKTVDFEDAAKQINTYVENGYQITAAILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIATVFHLNSDETKNIIPVARALIGNRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGALTT-PGTNTPLAILDLGAGSTDASIINGKGEII-----ATHLAGAGDMVTMIIQSEIGLEDR-------------------YLAEDIKKYPLAKVESIFHIRHEDGTVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSALDFEIPQLITDALSHYSLVAGRGNIRGKEGPRNAVATGLILAGGAKA |
| 3QFU Chain:A ((170-393)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QATKDAGT-IAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKA-FKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMST------------RIEIDSFV--DGI----------DLSETLTRAKFEELNLDLFKK-TLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDGKK-------ASKGINPDEAVAYGAAVQAGVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78804 for 1482 contacts (-53.2/contact) +
2D Compatibility (PS) -21338 + (NN) -8740 + (LL) 27460
1D Compatibility (HY) -800 + (ID) 1600
Total energy: -83822.0 ( -56.56 by residue)
QMean score : 0.302
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