Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELLLALLLWNILVFATYAIDKRRAIRGAWRISEKTLLIESLLLGGFGAFLGGEVFRHKTTKWYFRLVWYIGMIIDLAIIWLIWCY-
2B9K Chain:A ((1-47))
---------------------------------------AIKLVQSPNGNFAA--SFVLDGTKWIFKSKYYDSSKGYWVGIYEVWDRK
General information:
TITO was launched using:
RESULT:
Template:
2B9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54051 for 256 contacts (-211.1/contact) +
2D Compatibility (PS) -4832 + (NN) 1531 + (LL) 4676
1D Compatibility (HY) 400 + (ID) 550
Total energy: -52826.0 ( -206.35 by residue)
QMean score : -0.237
(partial model without unconserved sides chains):
PDB file :
Tito_2B9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B9K-query.scw
PDB file :
Tito_Scwrl_2B9K.pdb
: