Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIEALMEKERRVQYRLLSFLRGSPQAIALKLALLETGLSRATLLKYINNLNSYFEQEKVNCRIVYYKDKLFLEEDYNLSNQEVLKALMKDSIKYTILISLFNQRQFTIVGLSQELMVSEATLNRHLAHLNELLAEFDIAISQGKQIGDELQWRYFYYELFKQLWSYDKCQNMIKKLDLDSLILLIERLAQHTLTREAQQNLGLWFSICHHRLLAMEKISDNLKPIVEHYQCNAFYKRLDAALVLYMSRFALEYREGEVLATFAFLHSQNILPINTMEYIMGFGGPIIDCVTETIIYFKKESILADETSDQVIYQLGQLYSHYYFFKGHILVEQPDLEQTYRLIDHNMRDKLHHISKKIIANVNRIRPLTEDGCSLLTLHLLELLIFSKNSQKMPFRIGLDMTGNAVEQSLLEYRIRQHFSGNNS-IQV--EPYD---E-GKGFDMVIYQSRSRPYK--------AKLTYCLNKGAS-ERELQEIDSLIYDN |
1E2B Chain:A ((3-97)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKHIYLFSSAGMSTS-LLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26943 for 585 contacts (-46.1/contact) +
2D Compatibility (PS) -8788 + (NN) -5964 + (LL) 35104
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -8741.0 ( -14.94 by residue)
QMean score : 0.369
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