Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDIKEIREALPHRYPMLLVDRVLEVSEDE-IVAIKNVSINEPFFNGHFPEYPVMPGVLIMEALAQTAGVLELSK------EENKGKLVFYAGMDKVKFKKQVVPGDQLVMTAKFVKRRGTIAVVEAIAEVDGKLAASGTLTFAIGN
3DP1 Chain:A ((14-151))
---IEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAE
General information:
TITO was launched using:
RESULT:
Template:
3DP1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78962 for 955 contacts (-82.7/contact) +
2D Compatibility (PS) -14393 + (NN) -7384 + (LL) 336
1D Compatibility (HY) -15600 + (ID) 3200
Total energy: -119203.0 ( -124.82 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_3DP1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DP1-query.scw
PDB file :
Tito_Scwrl_3DP1.pdb
: