Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MEKFFKLKEHGTTIRTEITAGLTTFFAMSYILFVN------PAILSQTGMPAQGVFLATIIGAVVATS--VMAFYA---NLPYAQAPGMGLNAFFTYTVVFALGYTWQEALAMVFICG-------------LISLI----ITLTKVRKMIIESIPTTL---KSAITAGIGTFLAYVGIKNAGFLKFSIDPGTYDVVGKGAAKGLATITANSSATPGLVSFDNPAILLSLIGLSITIFFIVKGIRGGIILSILTTTLLGILMGVVKLDAINWEATNLSASFRDLKQVFGVALGEKGLISLFSNPSRLPSVLMAILAFSLTDIFDTIGTLIGTGEKVGILATTGDNHESKSLDKALYSDLIGTTFGAICGTSNVTTYVESAAGIGAGGRTGLTALVVAGLFAISSFFSPLVSIVPSQATAPILVIVGIMMLSNLKDIKWDDMSEAIP--AFFTSLFMGFTYSITYGIAAGFLTYTLAKVIKGQAKDIHVVLWILDILFILNFISLAIL---- |
| 4US3 Chain:A ((10-450)) | GREQWASRLGFILAAMGSA-VGLGNIWRFSYVTGENGGAAFLLVYLGFIALIGIPIVLAEFTIGRRAQSDAVGSFEKLAPGKPWKVAGLMGVAAGFLILSFYGVIAGWILFYLFNYITGQLWSAPAEGFGGFFEGFIANPTLPLFWQALFMIATIWIVAIGVKKGIERSNKILMPLLGVLLIALAIYSLTLG-------GAKEGLAFLF-----SPDWSALKDPGVYLAAISQAFFT------------LSLGMGALITYGSYVSKDSRLPGAAVSVAGLDTAFAIIAGIMIFP-AVFALGLSPSGGPGLVFVVLP----DIFDSIR-----------LGPIVGIAFFILLGAAALSSAVSLLEVPVAYFMRKFDWSRKQAAITLGVIITLLGIPSSLSFGVLGE----VTIIPG--------------LNIFDSVDFIASSVFLPLGGMIIALFIGWGWKTSDALAESDLT-----------DSVWGKLWILSLRFIAPIAILIVFLSAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4US3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -328934 for 3648 contacts (-90.2/contact) +
2D Compatibility (PS) -41139 + (NN) -2640 + (LL) 5352
1D Compatibility (HY) -24800 + (ID) 4250
Total energy: -396411.0 ( -108.67 by residue)
QMean score : 0.252
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