Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNKIILSTAALTALFLGYNSVTADTYNNYQPHRSNNMDLTEEYNYNNQIE-LQERIKKLNI----PFKEKLALLRKVKSRQDSYVLDTLRKEVENKNSEYSELEQEYQRISALIDAKFPQGKSSLAEKLHKELIWDLDGVKYDEGISKRTALKKLEGKINEYTKKYSYLF |
2HFI Chain:A ((69-123)) | --------------------------------------------YVHKEQIEAVKDNFLELVLQSYVHHIHKKRFKDITESVL--YTLHAVKDEIAREDSR----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6793 for 248 contacts (27.4/contact) +
2D Compatibility (PS) -5609 + (NN) -4636 + (LL) 7992
1D Compatibility (HY) -2000 + (ID) 550
Total energy: 1990.0 ( 8.02 by residue)
QMean score : 0.413
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