Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGTVNIQVEIDPEAYVTGLEHAKETKLMPEELLEGENNG-
2DCO Chain:A ((1-34))
-GSYD-----AYRTDCEELSGARTFRLAPAQWSCRETFQA
General information:
TITO was launched using:
RESULT:
Template:
2DCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14653 for 179 contacts (81.9/contact) +
2D Compatibility (PS) -3437 + (NN) -1794 + (LL) 1032
1D Compatibility (HY) -800 + (ID) 300
Total energy: 9354.0 ( 52.26 by residue)
QMean score : 0.142
(partial model without unconserved sides chains):
PDB file :
Tito_2DCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DCO-query.scw
PDB file :
Tito_Scwrl_2DCO.pdb
: