Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVVNEKAQFTAEELSMRNGSWEKYDNLDFLNRVGVAEAMLGKELMPKEARQDISSVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSGE--N----ANVKNLFTGTRALNANFNDDKSSMVYYEN-EVANYIKKTNHHVRYRVTPLFKNVELVARGVRIEAQSIEDETISFDVYIFNGQPGYDIDYLTGSSEKIMITK |
| 3NKQ Chain:A ((635-702)) | -----------------------------------------------------------------------------------------------------------------------------------------------------QMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFK-----R--VWTYFQRVLVKKYASE-RNGVNVISGPIFDYNYNGLRDIEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7169 for 303 contacts (-23.7/contact) +
2D Compatibility (PS) -6472 + (NN) -567 + (LL) 9880
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -9328.0 ( -30.79 by residue)
QMean score : 0.192
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