Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLYFPSISEETFDFEADWLVKAMDDNQKRILFVGQGKNGDLELELNYQDNPEPFDNLSVGELVQLPKELFVVPETISYQPQYECF
3DAO Chain:A ((217-242))
----------------SYLIDRFDLLPDEVCCFGDNLN-DIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSFL-
General information:
TITO was launched using:
RESULT:
Template:
3DAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -659 for 100 contacts (-6.6/contact) +
2D Compatibility (PS) -2945 + (NN) -3571 + (LL) 1244
1D Compatibility (HY) -4000 + (ID) 300
Total energy: -10231.0 ( -102.31 by residue)
QMean score : 0.002
(partial model without unconserved sides chains):
PDB file :
Tito_3DAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DAO-query.scw
PDB file :
Tito_Scwrl_3DAO.pdb
: