Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTVILAEKETQAAAYAESLGPASKKGKVHIIKHTPYFSDEVH---------VIAAEGHLF--EYGLPKDNW-DLDKLPLVDVSFKQTLKQDKVSKEIFKQIYQEVTAADQVIIGTDSDREGERIAYSILSHIPEG--KNKVTKRLWVNSLTTRALQKAFQNLREPIETYNYYLEAEARAQSDWLVGMNLSPLVTLELQKRGRLPKGKGNSL-SVGRVQTPGVRLICENDLAIQNFRPETYWKLQL----QDKETEISFSNKEKYSDSE-LILAQARQLKAISIVSSVEMEEKQRAAPHLFNLSDIQGLAAKQWGFEPTKTERLIESLYLKKYLSYPRTDTRFITEEEFDYLKNYLKSYQEVINCSFEAVNLEPRENYVNPEKVAKTSHYALIPTENIPNLVTLKPDERLIYEAVVRRTLLMFAADCRYSTTTVEVENQGLVFKTTGRQMFDPGWAAFSQQKLKGDIELPDYRVGDQIETKVI-IVEGMTKPPKRITESQLISDILPKYGLGTQATRATMLQTIQDRGYI--TKDKKTGQLFPTNKAYLLIHYLYDN---EFASPETTGGWELFLSQIGEGEINPREFVDAIKEKLAAQIAVVKERSD |
| 4CGY Chain:A ((37-600)) | --VLCVAEKNDAAKGIADLLSNGRMRRREGLSKFNKIYEFDYHLYGQNVTMVMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEKYCPENFV--DIKKTLERETRQCQALVIWTDCDREGENIGFEII-HVCKAVKPNLQVLRARFSEITPHAVRTACENLTEPDQRVSDAVDV--RQELDLRIGAAFTRFQTLRLQRI--FPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGIVEFNWKRHRLFNHTACLVLYQLCVEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYISYPRTETNIFPRD----LNLTVLVEQQTPDPRWGAFAQSILERGGPTPRNGNKSDQAHPPIHPTKYTNNLQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDVYPYDHWSDKILPVYEQGSHFQPSTVEMVDGETSPPKLLTEADLIA-LMEKHGIGTDATHAEHIETIKARMYVGLTPDKR---FLPGHLGMGLVEG-YDSMGYEMSKPDLRAELEADLKLICDGKKDKFVVLRQQVQKYKQVFIEAVAKAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84045 for 4278 contacts (-19.6/contact) +
2D Compatibility (PS) -57709 + (NN) -11489 + (LL) 936
1D Compatibility (HY) -27200 + (ID) 7100
Total energy: -186607.0 ( -43.62 by residue)
QMean score : 0.355
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