Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNRFAQLKENFEKGSPKRRVPTSRPIAAQKAPESYNKKGRYPFSLHQDVRYDKLEALVAYHGAKSASDYLERLIVQEWEKMQRKLKNKEK
2GPE Chain:A ((3-45))
---------------------------------------TTTMGVKLDDATR-ERIKSAATRID-RTPHWLIKQAIFSYLEQLENSD-----
General information:
TITO was launched using:
RESULT:
Template:
2GPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8835 for 196 contacts (-45.1/contact) +
2D Compatibility (PS) -4793 + (NN) -2621 + (LL) 2516
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -15933.0 ( -81.29 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2GPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GPE-query.scw
PDB file :
Tito_Scwrl_2GPE.pdb
: