Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANHRIDRVGMEIKREVNEILRLRVNDPRVQDVTITDVQMLGDLSMAKVFYTIHSTLASDNQKAQIGLEKATGTIKRELGKNLTMYKIPDLQFVKDESIEYGNKIDEMLRNLDKKD
3M5H Chain:B ((35-82))
---------------------------------------------------------AADYKSTQSAIDQITGKLNRLIGKTNQQFELIDNEFNEIEQ-QIGNVINWTRDAMTEIW
General information:
TITO was launched using:
RESULT:
Template:
3M5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12059 for 175 contacts (68.9/contact) +
2D Compatibility (PS) -5199 + (NN) -1947 + (LL) 5208
1D Compatibility (HY) -1200 + (ID) 700
Total energy: 8221.0 ( 46.98 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3M5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M5H-query.scw
PDB file :
Tito_Scwrl_3M5H.pdb
: