Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFQTNYIHLADEILSGKTSISYEQALEILNSDENWWEIYAAALYLKNQVSRNNIRLNVLLSAKQGLCAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGASVFCIAMSGTKPSK-REIEQLCQVIPEIKKSLPLEICLTAGFLDREQLHQLKQAGIDRINHNLNTPEE-NYPNIA--TTHSFKDRCDTLERIHNEDIDVCSGFICG--M----GESDEGLITLAFRLKELNPYSIPVNFLLAVEGTPLGKYNYLTPIKCLKIMAMLRFVFPFKELRLSAGREVHFENFESLVTLLVDSTFLGNYLTEGGRNQHTDIEFLEKLQLNHTKKELI |
| 2FTP Chain:A ((26-203)) | -----------------------------------------------------------------------------------------PIEVADKIRLVDDLSAAGLDYIEV-GSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALAP--NLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDT---IGV-------GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78526 for 1266 contacts (-62.0/contact) +
2D Compatibility (PS) -18025 + (NN) -9985 + (LL) 7268
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -101918.0 ( -80.50 by residue)
QMean score : 0.428
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