Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQKS-------NYFKGQIDYAVVI----PVFFLLMIGLASIYVATMNDYPSNIYIAMFQ--------------QVSWIIMGCIIAFVVM-------LFSTEFLWKATPYLYALGL---------TLMVLPLIFYSPQL-------------------FAATGAKNWVTIGSVTLFQPSEFMKISYILMLSRITVSFHQKNRKTFQDDWKLLGLFGLVTLPVMILLMLQKDLGTALVFLAILSGLILLSGISWWIILPILSTIVLFIASFLMIFISPNGKEWFYNLGMDTYQINRLSAWIDPFSFADSIAYQ-QTQGMVSIGSGGVTGKGFNILELSVPVRESDMIFTVIAE--NFGFIGSAIVLGLYLIIIYRMLRITIESNNQFYTFISTGFIMMIV--FHVFENIGAAVGILPLTGIP------LPFISQGGSSLL----SNLIGIGLVLSMSYQNTVRQAKANGSHLKYRSI---- |
| 4CI7 Chain:A ((4-470)) | GSHKTLDGVETAEYSESYLQYLEDVKNGDTAKYNGVIPFPHEMEGTTLRKSSVAYNPMDLGLTTPAKNQGSLNTAWSFSGMSTLEAYLKLKGYGTYDLSEEHLRWWATGGKYGWNLDDMSGSSNVTAIGYLTAWAGPKLEKDIPYNLKSEAQGATKPSNMDTAPTQFNVTDVVRLNKDKETVKNA-IMQYGSVTSGYAHYSTYFNKDETAYNCTNKRAPLNHAVAIVGWDDNYSKDNFASDVK----PESNGAWLVK---SSWGEFNSMKGFFWISYEDKTLLTD--TDNYAMKSVSK-----PDSDKKMYQLEYAGLSKIMSNKVTA--ANVFDFS---RDSEKLDSVMFETDSVGAKYEVYYAPVVNGVPQNNSMTKLASGTVSYS----GYINVPTNSYSLPKGKGAIVVVIDNTANPNREKSTLAYETDIDGYYLYEAKANLGESYILQNNKFEDINTYSEFSPCNFVIKAITKTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -345636 for 3144 contacts (-109.9/contact) +
2D Compatibility (PS) -38495 + (NN) 2764 + (LL) 1492
1D Compatibility (HY) -400 + (ID) 3500
Total energy: -383775.0 ( -122.07 by residue)
QMean score : 0.068
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