Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKQFIKLGIATLLTVISLYTPINLATNHTTENIVTAQEYKTKENGTLPFKHKRQLVLGELDDKGRATFAHIQLKVKDEPKKKRVKRLKTTPVGWHNFKFYYNDGTQKAWLMSRGRLICHQFS---GL-N---NERKNLVPMT-NWLNTGNYNSTNSSNPESMLFYEKQLKTWLSTHKNYYLDYKVTPIYQNNELIPRKIELKYVGIDKTGKLLPIFIGNKSTQDQFGISTVTLENTSPNATIDYLSGKAQNTVLSAKEQRKLIAKHEEEKRLAEKKVEEEKAAAETQKKLEEEQARLAAEAQRKQKEEQARLAAETQKKQETLVQEQTSQGYKRDYRGRWHRPNGQYASKAEIAAAGLQW |
| 3ISM Chain:A ((96-164)) | ---------------------------------------------------------------------------------------------------------------GYDRGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNR-----------DAWNTLEAHVRRLTKT--YSNVYVCTGPLYLPHKEDDGKSYVKYEVIGANTVAVPTHFYKVIVGESADHKLHMESYVMPNQVISNDTPISVFQVPPESVERSAGLLFFDQINRKQLTTINGKKVA---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ISM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9788 for 300 contacts (-32.6/contact) +
2D Compatibility (PS) -6311 + (NN) -1020 + (LL) 12192
1D Compatibility (HY) 800 + (ID) 450
Total energy: -4577.0 ( -15.26 by residue)
QMean score : 0.315
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