Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDF-AVSAPEIVLAAGAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYDLADYDDLFNEKMDMLLAINSATNLDWKGH-LTQTVNERPIYPRALQ-RQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAIDRYFFPTKQTVDNIAK-----GRPHWSEMTKEQYLRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 1LUC Chain:A ((1-354)) | -MKFGNFLLTYQPP------ELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNVGTAAIVLPTAHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLMKEGFNEGYIAADNEHIKF--PKIQLNPSAYTQGGAPVYVVAE-SASTTEWAAERGLPMILSWII-NTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYDSYVNATKIF--------------RIDYSYEINPVGTPEECIAIIQQDIDATGIDNICCGFEAN-GSEEEIIASMKLFQSDVMPYLKEKQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162327 for 2677 contacts (-60.6/contact) +
2D Compatibility (PS) -32960 + (NN) -6320 + (LL) 1736
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -215771.0 ( -80.60 by residue)
QMean score : 0.473
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