Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDELKPGDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSFGDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESLGEMPLPPYIHEKLEDRDRYQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFVK |
| 2YJG Chain:A ((82-149)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLPLLLDEIRKKN-KSANVKILIATGFHRGTTLQEMKAK-FGEDLV---EN-EQFVVHDSRNSENMELIGTLPSGGKLEINKLAVEADLLVAEGFIEPHFFAGFSGGRKSILPGIASVQCILANHCSEFIKNPYARTGVLENNPIHRDMIYAAKKANLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10595 for 328 contacts (-32.3/contact) +
2D Compatibility (PS) -7359 + (NN) -1760 + (LL) 11952
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -9812.0 ( -29.91 by residue)
QMean score : 0.348
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