Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPQTLRRLDVKKQFIEKIEPFAHRQTLKSKAVNSSKTTMSIQRYNHSGTKIQLRIGYSKVLIRIFSNGKINLTHYDLFFDREETLEITDAFDNGVYTQDEVDGFIKQAKTFIKQALKGEV
1AIS Chain:A ((36-68))
-------------------------------------SKYNPEEFPG----IICHLDDPKVALLIFSSGKLVVTGAKSVQDIERAVAKLAQKLKSIGVKFKRAPQIDVQNMVFSGDIGREF
General information:
TITO was launched using:
RESULT:
Template:
1AIS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15232 for 156 contacts (-97.6/contact) +
2D Compatibility (PS) -3501 + (NN) 50 + (LL) 2928
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -19405.0 ( -124.39 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_1AIS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AIS-query.scw
PDB file :
Tito_Scwrl_1AIS.pdb
: