Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLNAKGESNQILVDKEVHSTNLLLDIDEKPELFQGLLLSFQHVFAMFGATILVPLILGMPVSVALFASGCGTLIYQVATKFKVPVYLGSSFAYITAMALAMKQMHGDISAAQTGILFVGLIYVVVATVIKFVGNSWVDKILPPIIIGPMIIVIGLGLANSAVTNAGFVAKGDWRKMLVAVVTFLIAAFINTKGKGFIKIIPFLFAIIGGYILSIILGLVDLSPVEKAAWFELPKFYLPFKTGLFHSYKLYFGPEMLAILPISIVTIAENIGDHTVLGQICGRNFLKKPGLNRLLIGDGLATAFSALIGGPAETTYGENTGVIGMTRIASVTVIRNAAFIAIAFSFF--------GKFTALISTIPSAVLGGMAILLYG--VIASNGLKVLIENRVNFAEVRNLIIASSMLVLGLGGAVLDLGALTLSGTALSAIVGIILNLILPKESMKS------- |
| 3EB8 Chain:A ((53-399)) | ---------------AEKHSEKKLMD-SFSPSLSQDKMDG-EFAHANID---------GISIRLCLN-KGICSVFYLDGDK-------------IQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVS---GNFKTHKP------APEVIETAINCCTSIIPNDDY---------------------FHVKDTDF-----------------------------NSVWHDIYRDIRASDS---NSTKIYFNN-----IEIPLKLIADLINELGINEFIDSKKELQM--LSYNQVNKIINSNFP------------QQDLCFQTEKLLFTSLFQDPAFISALTSAFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCG-HIIKINAVRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPS--SEGLRNAIPPESRQVSFAIISPD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207487 for 2389 contacts (-86.9/contact) +
2D Compatibility (PS) -33195 + (NN) 2727 + (LL) 11104
1D Compatibility (HY) -7200 + (ID) 3450
Total energy: -237501.0 ( -99.41 by residue)
QMean score : 0.159
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