Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLYVQLMVILTFSFAGEVLSTIFNLPVPGSIIGLILLFLALKYKIIRLRHIDAVGNFLLANMTILFLPPAVGLMEHFQDIKPYLFGIAIIILGALFLNILTIGLVSQWIKKRYEGDYPEIGGKNGNFNE
2KRX Chain:A ((1-94))
-----------------------MPDPLMYQQDNFVVLETNQPEQFLTTIELLEKLKGELEKISFSDLPLELQKLDSLPAQAQHLIDTS-------CELDVGAGKYLQWYAVRLEKL------EHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KRX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58188 for 568 contacts (-102.4/contact) +
2D Compatibility (PS) -9895 + (NN) -450 + (LL) 3620
1D Compatibility (HY) -800 + (ID) 550
Total energy: -66263.0 ( -116.66 by residue)
QMean score : 0.196
(partial model without unconserved sides chains):
PDB file :
Tito_2KRX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KRX-query.scw
PDB file :
Tito_Scwrl_2KRX.pdb
: