Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVSH
4GEQ Chain:F ((2-20))
----------------------------------KDPNEVRSFLQDLSQVLAR-----
General information:
TITO was launched using:
RESULT:
Template:
4GEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6143 for 67 contacts (91.7/contact) +
2D Compatibility (PS) -2184 + (NN) -2010 + (LL) 3996
1D Compatibility (HY) -400 + (ID) 200
Total energy: 5345.0 ( 79.78 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_4GEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GEQ-query.scw
PDB file :
Tito_Scwrl_4GEQ.pdb
: