Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQLIALDMTDPLSTAIFAALDYLGKTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVF-----------------DYFDEDLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNIGFSTVPMHLNAYLVIADTGIHGHTKEAVDKVKSS----GEAVLPFLKELGYLAEASEDAIHKSDSKQ-------LGSLMTKAHQSLKQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVK---EKREAERLSQQLEREGAVNTWTEKV |
| 2R42 Chain:A ((124-360)) | ---------------------------------------------------------------------RTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKS--INKWAYEGERVIHGNPSGVDNSVSTWGGALRYQQG-KMSSLKRLPALQILLTNTKVPRSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDMNQHHLNALGVGHASLDQLCQVTAAHG-LHSKLTGAGGGGCGITLLKPGLERAKVEAAKQALTGCGFDCWETSIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85085 for 1417 contacts (-60.0/contact) +
2D Compatibility (PS) -22887 + (NN) -14548 + (LL) 6032
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -130488.0 ( -92.09 by residue)
QMean score : 0.393
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