Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSS----GVSQKVQQFRQNVVMLVIAIIQGLAIAISFQYHNG--FSLTKLLLATMILVTGAYIISWIGNLNAE-YGFG-GMTILVVVGMLVGQFNNIPLIFELF------------------QDG-YQ----------LAI-ILFLLWTLVAMY-LMITFERSEYRIPVMRTSIHNRLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPT-------NPDIT-------------SYNDYFS--------LSSIQGVVIYMILMLVLSVAFTFVN-----IDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
2WWB Chain:A ((19-472)) | --IQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSA----DPFYWMRVILA--SNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIKSARY---RGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCHYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETS-MVHELNRYIPTAAAFGGLCIGALSVLADFLGAIG--------SGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -304545 for 2882 contacts (-105.7/contact) +
2D Compatibility (PS) -39377 + (NN) -9230 + (LL) 720
1D Compatibility (HY) -23200 + (ID) 2950
Total energy: -378582.0 ( -131.36 by residue)
QMean score : 0.284
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