Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLNQRQERIIDIIKQFQPITGELIAEKLGVTRAALRSDLAVLSMLGIIDAKPKVGYFYLGQYHASIGTSHFEKMTVSEIMGIPLTVHQKDSVYDVIVHIFMEDAGCAFILDDDDFLCGVVSRKDLLKTSIGGGDLSKMPIGMVMTRMPHVTTVLENESLFAAADKLVSRKVDSLPVVRHDKQYPEKFKVIGKLSKTILASLFLEIRDY
3FWR Chain:B ((3-147))
------------------------------------------------------------GKTGTQLLADKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVI---KDTDKGFEVIGRVTKTNMTKILVSLSEN
General information:
TITO was launched using:
RESULT:
Template:
3FWR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93963 for 1021 contacts (-92.0/contact) +
2D Compatibility (PS) -15537 + (NN) -3008 + (LL) 5608
1D Compatibility (HY) -18000 + (ID) 2550
Total energy: -127450.0 ( -124.83 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3FWR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FWR-query.scw
PDB file :
Tito_Scwrl_3FWR.pdb
: