Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILVLHTGGTISMNANEKGQVMSSADNPMKYVDLSLDDLDLTVVDFLNLPSPQITPHHMLDIYHYLKQHASNFDGVVITHGTDTLEETAYFLDTMILPKIPIIITGAMRSTNELGSDGVYNYLSALRVANSTKAADKGVLVVMNDEIHAAKYVTKTHTTNVSTFQTPTHGPLGIIMKQDLLFFKATEER----VRFDLDKITG--TVPIVKAYAGMGDSGIISFLNSQNISGLVIEALGAGNMPPKAAQEIEELIEQGVPVVLVSRCFNG-------IAEPVYGYEGGGARLQESGVMFVKELNAPKARLKLLIALNAGLTGQNLKDYIEG |
| 1JJA Chain:A ((54-310)) | ------------------------------------------------VNIGSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTETMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDA-GYDGIVSAGVGNGNLYKSVFDTLATAAKTGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGT------------LNPQKARVLLQLALTQTKDPQQIQQIFNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167904 for 1965 contacts (-85.4/contact) +
2D Compatibility (PS) -26844 + (NN) -13488 + (LL) 4296
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -223740.0 ( -113.86 by residue)
QMean score : 0.566
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