Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNETLLLHGIQLILIIAMIITFYQIVRHIRSQKINPFKRFFTGLWIGFVTDALDTLGIGSFATTTTFFKLTKLVEDDRKIPATMTAAHVLPVLLQSLCFIFVVKVEALTLITMAGAAFIGAFVGAKMTKNWHAPTVQRILGTLLITAAIIMLYRMITNPGAGISDSVHGLHGIWLFVGIVFNFIIGVLMTMGLGNYAPELIFFSLMGLSPAVAMPVMMLDAAMIMTASSTQFIKSGRVNWNGFAGLVTGGILGVIVAVLFLTNLDLNSLKTLVVGIVLFTGAMLIRSSFKKTMPKSHH |
1E7P Chain:I ((1-254)) | MTNESILESYSGVTPERKKSRMPAKLDWWQSATGLFLGLFMI-GHMFFVSTIL--LGDNVMLWVTKKFQLDFIFEGGKPIVVSFLAAFVFAVFIAHAFLA--MRKFPINYRQYLTFKTHKDLMRHGDTTLWWI---QAMTGFAMFFLGSVHLYIMMTQPQTIGPVSSSFRMVSEWMWPLYLVLLFAVELHGSVGLYRLAVKWGWFDGETPDKTRANLKKLKTLMSAFLIVLGLLTFGAYVKKGLEQTDPN------------------------------------IDYKYFDYKRTH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E7P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126300 for 1736 contacts (-72.8/contact) +
2D Compatibility (PS) -25485 + (NN) 4102 + (LL) 4084
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -152599.0 ( -87.90 by residue)
QMean score : 0.119
|
|
|