Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIALFAGGDLTYF-----E-YDFDYFVGIDRGSLFLLKNGLSLDMAVGDFDSITEDELLYIKHYCSNIVSASAEKNDTDTELALKTIFKEFPEAQVTVFGAFGGRIDHMMSNIFLPSDTDLEPFMSQIRLKDEQNIVTYLPSGKNQVSRIEGMSYVSFMPE-SESTLQISGAKYELNKSNYFKKKMYSSNEFMTSPIEVELKDGYLIIIYSKDRG
2OMK Chain:A ((7-206))
IPQAIILANGEYPAHELPLRLLAEAQFVVCC--AANEYISRGHTPDVIIGDGDSLLPEYKKRFS----SIILQISDQETNDQTKAVHYLQSKGI-RKIAIVGATGKREDHTLGNISLLVEYMRSGM--EVRTVTDYGTFIPV-SDTQS-FASYPGQQVSIINFGA-KGLKAEGLFYPLSDFTNWW--QGTLNEAIADEFTIHCT-GEYLVFLAY---
General information:
TITO was launched using:
RESULT:
Template:
2OMK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118017 for 1502 contacts (-78.6/contact) +
2D Compatibility (PS) -20454 + (NN) -6621 + (LL) 768
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: -150324.0 ( -100.08 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_2OMK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OMK-query.scw
PDB file :
Tito_Scwrl_2OMK.pdb
: