Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKDKLVLRLTTTLLVFGLGGVWFYNYKNDNV--EPTVTSASDQTTTFIQTIS-PTAIEIS--------KTYDLYASVLL----AQAILESSSGQSDLSKAPNYNLFGIKGEYKGKSVQMPTLEDDGKGNMTQIQAPFRAYPNYSASLYDYAELV------SSQKYASVWKSNTSSYKDATAALTGLYATDTAYASKLNQIIETYSLDAYDK |
| 8CPA Chain:A ((79-249)) | -----------------------GVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETY--HGKYANSEVEVKSIVD-----FVKNHGNFKAF----LSIHSYSQLLLYPYGYTTQSIPDKTELNQVA-KSAVAALKSLYGTSYKYGSIITTIYQASGGSIDWS |
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General information:
TITO was launched using:
| RESULT:
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Template: 8CPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18329 for 813 contacts (22.5/contact) +
2D Compatibility (PS) -15263 + (NN) 5087 + (LL) 1476
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -771.0 ( -0.95 by residue)
QMean score : -0.041
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