Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDDDYHFSAV-AITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQVPTERGH---LPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
1LB2 Chain:A ((28-204))
----------------------------------------TLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQ-PDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR-------
General information:
TITO was launched using:
RESULT:
Template:
1LB2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97209 for 1199 contacts (-81.1/contact) +
2D Compatibility (PS) -18699 + (NN) -6613 + (LL) 3952
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -130469.0 ( -108.81 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_1LB2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LB2-query.scw
PDB file :
Tito_Scwrl_1LB2.pdb
: