Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKYSSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAIN--KNQLFVLRFGIIHCIADS-----GVYGMLVE--FP--K-DMDIKDDEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF
3FHW Chain:A ((3-100))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLELSARVLECGAMRHTPAGLPALELLLVHESEVVEAGRRVELTISAVALGDLALLLADTPLGTEMQVQGFLAPARK--D-SVKVKLHLQQARRIAGSM--------


General information:
TITO was launched using:
RESULT:

Template: 3FHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 312 -53585 -171.75 -637.92
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -171.75
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.273

(partial model without unconserved sides chains):
PDB file : Tito_3FHW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FHW-query.scw
PDB file : Tito_Scwrl_3FHW.pdb: