Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFIRTENFQTFIRLYPVVTFILALQAVLWLFFSLPAHSVVLWRDTVTGYNLGVANGEWWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGTYVTEPLDYVHVGA-SGAIFGLFGVYLFMVLFRNELIGQEHSKMIITLLAFAVL-----------MSFINSNINMMAHLFGLCGGFLLSFLCVQKKERRY
3ZMH Chain:A ((44-177))--------------------------------------------------------EFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG---YVQQKFSGPWFGGLSGVVYALMGY----VWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANG-----AHIAGLAVGLAMAFV---------


General information:
TITO was launched using:
RESULT:

Template: 3ZMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 517 -85026 -164.46 -696.93
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -164.46
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.267

(partial model without unconserved sides chains):
PDB file : Tito_3ZMH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZMH-query.scw
PDB file : Tito_Scwrl_3ZMH.pdb: