Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVAIILISLILDNIGFFEWAALHMAKAAKGYGVRMFVYVSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIADTTSLPFVVSNLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLFFRKSIPK---RYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIGYFASEFFSIPVSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVRNAGLTDVLSDVIQAAADQGLFAGTIGMGFIAAILSSIMNNL---PTVMIDALAIAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKISWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF
5EAU Chain:? ((221-548))KNNVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLD-----------------------FVTTLPYAR-------DRVVECYFWALGVYFEPQYSQARVMLVKTISMISIVDDTFDAYGTVKELEAYTDAIQR----------------WDINEIDRLP----------------------------DYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPP---VSEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNP--------------------KILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNHPEKVLKPHIINLLVDSIKI-----------------------


General information:
TITO was launched using:
RESULT:

Template: 5EAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1372 -208646 -152.07 -662.37
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -152.07
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.267

(partial model without unconserved sides chains):
PDB file : Tito_5EAU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EAU-query.scw
PDB file : Tito_Scwrl_5EAU.pdb: