Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKP-NISLINAVFRIACGLTIMSAASAKFTKKPWCRMHLFYIFMGAMKAGSGILRFCPVTYMFQHSDSGNNEHQNG
2AYJ Chain:A ((1-56))MPLTDPAKLQIVQQRVFLKKVCRKCGALNPIRA----------TKCRRCHSTNLRL----------KKKELPTKKG


General information:
TITO was launched using:
RESULT:

Template: 2AYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 148 -2266 -15.31 -41.19
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -15.31
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.032

(partial model without unconserved sides chains):
PDB file : Tito_2AYJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AYJ-query.scw
PDB file : Tito_Scwrl_2AYJ.pdb: