Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKHSFSRFFGLGEKEQEPEIAEHDTNKEEILEIPVNAIVPNRFQPRTIFSDEKIKELAMTIHTHGIIQPIVVRHTEEEGQYELIAGERRWRAVQSLEWEKIPAIIKDFSDTETASVALIENLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPQPVQEAIMEKKITERHARALIPLKQPELQVTLLTEIIEKSLNVKQTEDRVVKMLEQGQRKPKPRRKAFSRDTRIAMNTIRQSLSMVEDSGVKLNTEEEEFEEYIQLTIRIPK
4UMK Chain:B ((45-219))-----------------------------------------PYQPRKVFSEDSLEELAQSIKEHGLLQPVLV--VSENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGL-DGEKQELILNSIIGQKLSVRQTED----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4UMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 547 -27586 -50.43 -157.63
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -50.43
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_4UMK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UMK-query.scw
PDB file : Tito_Scwrl_4UMK.pdb: