Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADVPLDAQERLELCDLLEELGP----AVATLIEGWTAHDLAAHIVLRERDLVAGLCIVLPGPFQRFAERRRARLAQSKDFTWLVARIRSGPPMGFFRIGWVRTLANLNEFFVHHEDVRRASGRGPRSLTPEMDAALWRNVRRGSHFLSRRLHGCGLEIEWVGTGKRVRVRSGEPTARLTGPPGELLLYVFGRRAVARVEVSGPLEAIAAVHRTHFGM |
| 2QNL Chain:A ((15-59)) | ----DAWNTQSSRTDKLIQSLSNEALAVETA-PGRNSGTYLLGHLTAVHD------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8877 for 174 contacts (-51.0/contact) +
2D Compatibility (PS) -4627 + (NN) -3991 + (LL) 11840
1D Compatibility (HY) 1600 + (ID) 200
Total energy: -4255.0 ( -24.45 by residue)
QMean score : 0.259
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