Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVLGIETSCDETGVGIARLDPDGTVTLLADEVASSVDEHVRFGGVVPEIASRAHLEALGPAMRRALAAAGLKQPDI--VAATIGPGLAGALLVGVAAAKAYSAAWGVPFYAVNHLGGHLAADVYEHGPLPEC--VALLVSGGHTHLLHVRSLGEPIIELGSTVDDAAGEAYDKVARLLGLGYPGGKALDDLARTGDRDAIVFPRGMSGPADDR--YAFSFSGLKTAVARYVESHAADPGFRTADIAAGFQEAVADVLTMKAVRAATALGVSTLLIAGGVAANSRLR----ELATQRCGEAGRTLRIPSPRLCTDNGAMIAAFAAQLVAAGAPPSPLDVPSDPGLPVMQGQVR |
| 4WQ4 Chain:B ((3-333)) | ---VLGIETSCDATGIAIY----DDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNP-PEFPFVALLVSGGHTQLISVTGIGQYEL-LGESIDDAAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPR----PMTDRPGLDFSFSGLKTFAANTIRDNGTDDQTR-ADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGE----VFYARPEFCTDNGAMIAYAGMVRFKAGA-TADLGVSVRPRWPLAE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212500 for 2873 contacts (-74.0/contact) +
2D Compatibility (PS) -35338 + (NN) -23636 + (LL) 764
1D Compatibility (HY) -26000 + (ID) 8000
Total energy: -304710.0 ( -106.06 by residue)
QMean score : 0.520
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