Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTSTPSPVFGNQEFHYTREDFQQVRERLYRLTGISLAESKAQLVYSRLSRRLRLLRLGSFAEYFTHLDREPGEQQLFVNALTTNLTAFFRERHHFPLLADLARRQLQRHRPLRIWSAAASTGEEPYSIAITLVEALGSFDPPVKIVASDIDTGVLDCARQGVYPLERLEQMPAPLKKRFFLRGTGPNAGKARVVEELRQLVEFRQINLLEADWSIAGELDAIFCRNVMIYFDKPTQTRLLERMVALLRPEGLFFAGHSENFVHASHLVRSVGQTVYSPA |
| 1VL5 Chain:A ((41-145)) | -------------------------------------------------------------------------------------------------------------KGNEEVLDVATGGGH----VANAFAPF------VKKVVAFDLTEDILKVARAFIEG-----------------------NG--------HQQVEYVQGDAEQ-PF-TDERFHIVTCRIAAHHFPNPA--SFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -73249 for 819 contacts (-89.4/contact) +
2D Compatibility (PS) -10719 + (NN) -1184 + (LL) 11200
1D Compatibility (HY) 800 + (ID) 900
Total energy: -74052.0 ( -90.42 by residue)
QMean score : 0.318
|
|
|