Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDMHDDIPAGSRCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRH-NMLGIKTEGEVQAVYVDTPGLHKSGEKALNRYM-NRTASAALKD---VDVVIFVVD-RTRWTEEDQMVLERVQYVSCPVLIAVNKTDRIE--EKADLLPHLEWLTQQLPKAEVVPISAQHGTNLDVLEKLVAERLPESEHFFPEDQITDRSSRFLAAELVREKIMRQLGAELPYQITVEIEEFKQEGRILHIHALILVEREGQKKIIIGDKGERIKSIGQNARKDMEVLFDSKVMLNLWVKVKGGWSDDERALRSLGYGDL |
| 3PQC Chain:A ((24-193)) | --------------GEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFYLVNS----KYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLLK----------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93386 for 1180 contacts (-79.1/contact) +
2D Compatibility (PS) -18224 + (NN) -12061 + (LL) 10592
1D Compatibility (HY) -14800 + (ID) 2400
Total energy: -130279.0 ( -110.41 by residue)
QMean score : 0.590
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