Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSESDRLFAQPQQRVADFVFNEDVVRVFPDMIKRSVPGYPTIVENIGVLGAQFAQPNSVLYDLGCSLGAVTQSLRRHVRNDGCRVIGVDNSHAMIERCSEYLHAQDAMYQELLPVELIEADILALDLQPTSLVAMNFTLQFVAPDQRLGLLRRIRQALLPGGALILSEKLRFADAQEHALLTDLHIAFKRANGYSELEIAQKRSALENVMLPDTFEEHRERLLAAGFSRVSQWFQCLNFASMIALP
4GEK Chain:G ((29-255))
--------------LGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDA----YKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVALK
General information:
TITO was launched using:
RESULT:
Template:
4GEK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177131 for 1857 contacts (-95.4/contact) +
2D Compatibility (PS) -24117 + (NN) -3504 + (LL) 1448
1D Compatibility (HY) -25200 + (ID) 6250
Total energy: -234754.0 ( -126.42 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_4GEK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GEK-query.scw
PDB file :
Tito_Scwrl_4GEK.pdb
: