Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAGIGTPLALAAINAPHSPQRRRALKTLLLVLAAGGSAWGLRESGSLQRWSADYATGVGERRRLALADGSRLELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDPRPLHVYSAEGRLRPVGTRFDVRQFAGRTRVAVHEGAVQVE--NRAGQGLLLPSGRQLDFDRERL---GAPQPLPVGSGAWTDGMLVAAGMRLDEFLAEVARYRPGRLGCDPRIGGLRISGSYPLDDSERILATLPAVLPVEVRRVTRYWVGVHPRE |
1Q1R Chain:B ((79-123)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 359 for 143 contacts (2.5/contact) +
2D Compatibility (PS) -4278 + (NN) -4149 + (LL) 19168
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: 6750.0 ( 47.20 by residue)
QMean score : 0.422
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