Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTKAKQQSSQQMTRGFEPYQETKGEEYMSERMRAHFTAILNKWKQELMEEVDRTVHHMQDEAANFPDPADRASQEEEFSLELRARDRERKLIKKIDETLQLIEDEEYGWCDSCGVEIGIRRLEARPTATLCIDCKTLAEIREKQLGS
1TJL Chain:D ((19-151))
---------------GVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG
General information:
TITO was launched using:
RESULT:
Template:
1TJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17359 for 800 contacts (-21.7/contact) +
2D Compatibility (PS) -15252 + (NN) -13640 + (LL) 1288
1D Compatibility (HY) -13200 + (ID) 5000
Total energy: -63163.0 ( -78.95 by residue)
QMean score : 0.715
(partial model without unconserved sides chains):
PDB file :
Tito_1TJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TJL-query.scw
PDB file :
Tito_Scwrl_1TJL.pdb
: