Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IQLIPPLINLLMSIEPDVIYAGHDNTKPDTSSSLLTSLNQLGERQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPLEGLRSQTQFEEMRSSYIRELIKAIGLRQKGVVSSSQRFYQLTKLLDNLHDLVKQLHLYCLNTFIQSRALSVEFPEMMSEVIAAQLPKILAGMVKPLLFHKK
2Q1H Chain:A ((4-249))
------LISILEAIEPEVVYAGYDNSQPDTTNYLLSSLNRLAGKQMVSVVKWAKALPGFRNLHLDDQMTLIQYSWMSLMAFSLGWRSYKHTNGQMLYFAPDLIFNEERMQQSAMYDLCQGMRQISQEFVRLQVTYEEFLCMKVLLLLSTVPKDGLKSQASFDEMRMNYIKELRRAIA---NNSSQNWQRFYQLTKLLDSMHDLVGGLLQFCFYTFVQSQALSVEFPEMLVEIISDQLPKVMAGMAKPLLFHK-
General information:
TITO was launched using:
RESULT:
Template:
2Q1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175741 for 1919 contacts (-91.6/contact) +
2D Compatibility (PS) -26084 + (NN) -13299 + (LL) 884
1D Compatibility (HY) -34000 + (ID) 8100
Total energy: -256340.0 ( -133.58 by residue)
QMean score : 0.725
(partial model without unconserved sides chains):
PDB file :
Tito_2Q1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q1H-query.scw
PDB file :
Tito_Scwrl_2Q1H.pdb
: