Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARRGPGWRPLLLLVLLAGAAQGGLYFRRGQTCYRPLRGDGLAPLGRSTYPRPHEYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDC-----GNAGSCEGGNDLSVWDYA-HQHGIPDETCNNYQAKDQEC--DKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYAN-GPISCGIMATE-RLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGDPIV |
| 2FT2 Chain:A ((2-199)) | -------------------------------------------------------------LPDSVDWREKGCVTEVKYQGS------CGACWAFSAVGALEAQLKLKT-GKLVS--LSAQNLVDCSTEKYGNKG-CNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPY----------------GREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRM---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71163 for 1489 contacts (-47.8/contact) +
2D Compatibility (PS) -20388 + (NN) -9220 + (LL) 5404
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -112717.0 ( -75.70 by residue)
QMean score : 0.333
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