Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKATSL
3OZG Chain:D ((20-247))
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKA---
General information:
TITO was launched using:
RESULT:
Template:
3OZG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -198855 for 1845 contacts (-107.8/contact) +
2D Compatibility (PS) -24530 + (NN) -12665 + (LL) 200
1D Compatibility (HY) -37200 + (ID) 11400
Total energy: -284450.0 ( -154.17 by residue)
QMean score : 0.796
(partial model without unconserved sides chains):
PDB file :
Tito_3OZG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZG-query.scw
PDB file :
Tito_Scwrl_3OZG.pdb
: