Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAFLWAQDRDGLIGKDGHLPWHLPDDLHYFRAQTVGKIMVVGRRTYESFPKRPLPERTNVVLTHQEDYQAQGAVVVHDVAAVFAYAKQHPDQELVIAGGAQIFTAFKDDVDTLLVTRLAGSFEGDT---KMIPLNWDDFTKVSSRTVEDTNPALTHTYEVWQKKA
3SAI Chain:A ((6-164))
-VSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAI-GRPLPGRRNIIVTRNEGYHVEGCEVAHSVEEVFELCKN--EEEIFIFGGAQIYDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKE-VFVEKGLTDEKNP-YTYYYHVYEKQ-
General information:
TITO was launched using:
RESULT:
Template:
3SAI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84817 for 1112 contacts (-76.3/contact) +
2D Compatibility (PS) -16903 + (NN) -5458 + (LL) 392
1D Compatibility (HY) -16000 + (ID) 3150
Total energy: -125936.0 ( -113.25 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3SAI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SAI-query.scw
PDB file :
Tito_Scwrl_3SAI.pdb
: