Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
1FKF Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1FKF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54473 for 791 contacts (-68.9/contact) +
2D Compatibility (PS) -12024 + (NN) -7222 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5200
Total energy: -92311.0 ( -116.70 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_1FKF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FKF-query.scw
PDB file :
Tito_Scwrl_1FKF.pdb
: